Insertion junction: CLIP2.038851_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038851
Chromosome:chromosome 12
Location:1287226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489500 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGATCCTAGCATCGAGCACAACGCCACCCCAAGCACCACCTGGTGGCG
Internal bar code:CGTTATAGGTAAAGATCCTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1711
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTACAGCCGTCACAACAG
Suggested primer 2:GCGATGTTCGATGCTCAACC