Insertion junction: CLIP2.038853_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038853
Chromosome:chromosome 3
Location:718230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145907 (1 of 1) 2.1.1.205 - tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATATGTGTATGAATGCATGAAAGTGTATCTGTGTATGCAAGTATATGTG
Internal bar code:TTGCAGCCTAGATTGGTTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1197
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGGGTGATGGGGTTAC
Suggested primer 2:TCACACATGGCTCCTCACAC