Insertion junction: CLIP2.038866_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038866
Chromosome:chromosome 3
Location:1882150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154700 (1 of 3) PF01937 - Protein of unknown function DUF89 (DUF89) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGGGTCTAGGCGGCGGTGTGGCGCGTGGTAATCCCTTGCACATCGCC
Internal bar code:GCCAAGTGGACGATGGTCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:126
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTTCGCATGTAACGAGC
Suggested primer 2:GCGGGTGTAGATGAGGGAAG