Insertion junction: CLIP2.038868_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038868
Chromosome:chromosome 8
Location:3571080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379450 (1 of 1) K01190 - beta-galactosidase (lacZ) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCGCATTCCTCACGCTCCGGGCGCCCGGCCAGGCGATAGCACCACAC
Internal bar code:ATGAGCCCCAATTTCCGCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:588
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTGCACTCGACCAGTTT
Suggested primer 2:TATGCATGGGAGCGCACTAG