Insertion junction: CLIP2.038868_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038868
Chromosome:chromosome 8
Location:3571082
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379450 (1 of 1) K01190 - beta-galactosidase (lacZ) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCAAACTTCCAGCCAGCCAGCAACTTGTCGGTACAGTAACTCCGGCG
Internal bar code:TTTAATATGGGCCAAGGCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1117
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCATGGGAGCGCACTAG
Suggested primer 2:CCTCTGCACTCGACCAGTTT