Insertion junction: CLIP2.038873_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038873
Chromosome:chromosome 17
Location:4591241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732100 SSA4 cilia-sensing, structure and/or assembly; (1 of 1) PTHR21439//PTHR21439:SF0 - OXIDORED-NITRO DOMAIN-CONTAINING PROTEIN // PROTEIN OSCP1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTGTGAACGAATGTGAGCGGCGCATGTCGGCAAGCGCGTGGCGTGGC
Internal bar code:TTTGTTACTGATGTGAGTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4092
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGATGAGGCTTTCCATGT
Suggested primer 2:GACATAGAGCGCTGGCATCT