Insertion junction: CLIP2.038873_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038873
Chromosome:chromosome 17
Location:4591244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732100 SSA4 cilia-sensing, structure and/or assembly; (1 of 1) PTHR21439//PTHR21439:SF0 - OXIDORED-NITRO DOMAIN-CONTAINING PROTEIN // PROTEIN OSCP1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCCGCGCCGCTCCCGCGCCAACCGTGTTCTGACTATTCTGCTACACC
Internal bar code:GGATGTCAGAAGGCTGGGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:875
LEAP-Seq percent confirming:81.9672
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GACATAGAGCGCTGGCATCT
Suggested primer 2:TGCGATGAGGCTTTCCATGT