Insertion junction: CLIP2.038878_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.038878
Chromosome:chromosome 7
Location:6043975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355050 (1 of 1) IPR003610 - Carbohydrate-binding module family 5/12 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGTGTAACCGATCCTTTCAATCCATACCCCGCTGCACCGTTTGCCAG
Internal bar code:AGTCATTCTCCCCATGCAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1356
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCTAATTGCTGCGAGCG
Suggested primer 2:GAACTTGAGCCCGAGGACAA