Insertion junction: CLIP2.038879_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038879
Chromosome:chromosome 1
Location:7453800
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800135 (1 of 1) PTHR30217//PTHR30217:SF10 - UNCHARACTERIZED PROTEASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCATCCGGCCTCACCGCCGCCCCCGCGGATGTGCCTCGCAGCCGCGG
Internal bar code:AGGCTAGTAGTGGTCGAATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:275
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGACACAGCACACGAATGC
Suggested primer 2:ACGCTTCCTGCAGGAGTAAC