Insertion junction: CLIP2.038880_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038880
Chromosome:chromosome 1
Location:6558315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g046800 MSP1 Membrane selenoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACGTGGGCGCCGGGTTAGCTATCACGTAACGCCGGTGAGGCAAGCG
Internal bar code:CTTAAAGGTCGGTCCGCTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1769
LEAP-Seq percent confirming:74.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGCGGATGAAGGATTTG
Suggested primer 2:GCTGCGTCTTAGCGTATCCT