Insertion junction: CLIP2.038886_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038886
Chromosome:chromosome 12
Location:2010175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801373 (1 of 2) IPR000104//IPR000477//IPR005135 - Antifreeze protein, type I // Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGTTCGCTCTGCCGGGACTGGCGTGTGTGGGCCAGCTGGTTGCAGCG
Internal bar code:TTCCTAATCAAGGAGTTCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3223
LEAP-Seq percent confirming:46.8085
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTGCAGTCCCAAAACCA
Suggested primer 2:GACATGGATGTGTTTCGGCG