Insertion junction: CLIP2.038892_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038892
Chromosome:chromosome 7
Location:2432541
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329000 CPLD47,PAM68 putative PSII biogenesis factor; (1 of 1) PF11947 - Protein of unknown function (DUF3464) (DUF3464) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACGGCACTTTGGTGGGCATCCCATCTGCAGGGGCCCCCTGTGGCGC
Internal bar code:GAGGCGAAATGTCTGGGTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1259
LEAP-Seq percent confirming:84.4444
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATCTGTAGCCCACCGTA
Suggested primer 2:CCCAGGCTGTTTGGTATCGT