Insertion junction: CLIP2.038895_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038895
Chromosome:chromosome 2
Location:3891354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g101600 (1 of 3) PF11735 - Cryptococcal mannosyltransferase 1 (CAP59_mtransfer) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAACATGCACCACCACGCCAGGCCTGGCACGCCACACCTGGCACGCCA
Internal bar code:CCGTGGAGTTGTAAGTGTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:889
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCTTGCCTGTAACCTGA
Suggested primer 2:GTACGTTGTCGCCACAGGTA