Insertion junction: CLIP2.038896_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038896
Chromosome:chromosome 8
Location:3419465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378200 PPO1 (1 of 1) 5.1.99.6 - NAD(P)H-hydrate epimerase / NAD(P)HX epimerase; Pyridoxamine 5'-phosphate oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCGCTTGGCCTCCGCCGCCGCGCTCTCCGCCGCCGCGCTCTCCGCCG
Internal bar code:GATGGATGGCTTGTATAAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:626
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCAAGGTCAGGCGTTTG
Suggested primer 2:ACATTCCCTCTCCTCCCTCC