Insertion junction: CLIP2.038907_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038907
Chromosome:chromosome 17
Location:3781234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726800 (1 of 1) PTHR15975//PTHR15975:SF0 - UNCHARACTERIZED // CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGCAGTGCCGGGGCGGGTGCGCCGGGGGTGCTCTGGACGGGTGCTC
Internal bar code:TAGTTATGTGGACAGTCGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2417
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCAAGGTTGTTGGTCTG
Suggested primer 2:TCGTGCACCTGTACATCACC