Insertion junction: CLIP2.038907_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038907
Chromosome:chromosome 17
Location:3781242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726800 (1 of 1) PTHR15975//PTHR15975:SF0 - UNCHARACTERIZED // CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 11 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCCCAAAACCTGCGCCCGCCACGCCACGCCACCACCCTGCCCCGCCG
Internal bar code:TAGTTATGTGGACAGTCGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTGCACCTGTACATCACC
Suggested primer 2:GCTGCAAGGTTGTTGGTCTG