Insertion junction: CLIP2.038912_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038912
Chromosome:contig 35
Location:26062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre35.g802212 (1 of 2) PTHR18945:SF559 - PROTEIN LGC-12 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTAAAGTGTGGCCAAGTTTTCAGGTGTAGTGGGGTTGGGGGGCGGAT
Internal bar code:TATGCGGCTTGTATGAGGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2439
LEAP-Seq percent confirming:2.94118
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGGTCAATTCAGCTCCT
Suggested primer 2:GTAGGGGCTCCATTCGCTAC