Insertion junction: CLIP2.038935_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038935
Chromosome:chromosome 12
Location:6963169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00238261

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTTACGGGTGGGGGCATGGATGGGGTTGGGCAGCTGGTAGAGCGCCAC
Internal bar code:GGAATAAATGCATTACTGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5697
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:130
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:130

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGCGACACGTAGCATCG
Suggested primer 2:GGTCAGTTGCAGACTCAGCT