Insertion junction: CLIP2.038938_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038938
Chromosome:chromosome 10
Location:5972517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461350 BUG23 Basal-body proteins with upregulated genes 23 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGGCTCATCAAGCATCTGCCTTAGTTCTTCTAGCTCTCTGAGAACGC
Internal bar code:TATGTTATTTGGCCGGGTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2234
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCTGCCCAAACACAAAG
Suggested primer 2:TCCTACCTCCGCGTCCTTTA