Insertion junction: CLIP2.038946_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038946
Chromosome:chromosome 10
Location:587615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801104 (1 of 1) IPR000104//IPR003072//IPR004333 - Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type // Transcription factor, SBP-box CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAGGTCCAGCTGCAAGTCATCCGGTAAGGCGCTGTACAAGGCACCTG
Internal bar code:GGGCCCGTCGGTTGCAATTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:6225
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:GGACATGGTGCTGCAGTAGT
Suggested primer 2:CCAGTACCATGGGGAGAGGA