Insertion junction: CLIP2.038949_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038949
Chromosome:chromosome 6
Location:8681827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g310100 (1 of 6) IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCCGCTGCAGAATGCGCTCCACGGACGCATTTGATCCCGGCACTTTA
Internal bar code:AGGAAGAGCAGATTATTAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2154
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCCACTCTATGCTGCTC
Suggested primer 2:CTGGGTCAGGTCGTCGAAAA