Insertion junction: CLIP2.038952_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038952
Chromosome:chromosome 5
Location:2430926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238687 PHC35 Pherophorin-chlamydomonas homolog 35; (1 of 1) IPR011993//IPR024616 - Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) // Pherophorin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGAGAGACCCGGCGCGTGTGTGTTTGTGCTGCGTGCACGCCCCCCTCC
Internal bar code:CCCTTAATTTATACTTTTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1813
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATTACACACGGCCTGGTGAG
Suggested primer 2:GTTTGTGTGTGTGTCGCCTC