Insertion junction: CLIP2.038956_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038956
Chromosome:chromosome 3
Location:2123125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g156700 FAP185,Nphp3 (1 of 2) IPR011990//IPR013026//IPR019734 - Tetratricopeptide-like helical domain // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat; Flagellar Associated Protein 185 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCCAACCAGTCATGCCTGGACCCAGCCCCTCCCCCTTCTACAACCCC
Internal bar code:TGGGGAAGAAGGGAACGGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:521
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGTAGGGAGGAGGGTT
Suggested primer 2:TTGCAGTTTGAATGGGCGTG