Insertion junction: CLIP2.038959_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038959
Chromosome:chromosome 12
Location:5398791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529250 (1 of 8) PTHR11339//PTHR11339:SF290 - EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED // PROTEIN T26A8.1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTCCTCTAGCACCACTACCGGGGGCAGCGTTGGGAGCAGCGTGATGG
Internal bar code:TGAATATTTTGTTTTGTGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2488
LEAP-Seq percent confirming:41.573
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAGATTGACGACGCCCT
Suggested primer 2:CCCCTAAGCTTGGCTGTGAA