Insertion junction: CLIP2.038962_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038962
Chromosome:chromosome 12
Location:5680325
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531950 (1 of 4) PTHR10217//PTHR10217:SF509 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CNG CHANNEL-LIKE, ISOFORM E intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGACGGGATGCTAGGATGGGAGAGCGCTAGAACCTGTGGGGTCTTGC
Internal bar code:GGTGAAACACTAATTCGTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2571
LEAP-Seq percent confirming:98.6487
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCACGTAGTAGTAGGCC
Suggested primer 2:TCCGTTCATGTGTGTGCGTA