Insertion junction: CLIP2.038962_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038962
Chromosome:chromosome 12
Location:5680331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531950 (1 of 4) PTHR10217//PTHR10217:SF509 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CNG CHANNEL-LIKE, ISOFORM E intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATACCAGTCCCTGCTTGCATGCGCTGTGCCCATGCGCTTCTGCACGGC
Internal bar code:CGGGTGTACCACGGGCGGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:10.5263
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTTCATGTGTGTGCGTA
Suggested primer 2:GCGTCACGTAGTAGTAGGCC