Insertion junction: CLIP2.038966_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.038966
Chromosome:chromosome 7
Location:902607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800773 (1 of 1) PF00515//PF07719//PF13414//PF13637 - Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATTGATCGAAGCTGGTCATCGTAGTATCATTGAGGGCTTCGTTGCATG
Internal bar code:GTAAAGGTACCTATACTCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2142
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGACCACAAACGTGCTG
Suggested primer 2:TGTGTGTGCGTGTCTCTCTC