Insertion junction: CLIP2.038973_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.038973
Chromosome:chromosome 11
Location:3486838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477500 (1 of 1) PF13664 - Domain of unknown function (DUF4149) (DUF4149) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCAGCTTTTAACGTCCCGACTTTTCACTCTCCCAGGTACGACATTGA
Internal bar code:CGTACGCTTGCTGGCCAAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1449
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAACCCCCTGATGCTTGT
Suggested primer 2:CTAGTGGAGGACAGGGAGCT