Insertion junction: CLIP2.038974_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038974
Chromosome:chromosome 12
Location:2564177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801381 (1 of 71) PF12499 - Pherophorin (DUF3707) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTGCGTGCGCTCACTCGCAGAAGGGGAAGGGCGTCTGCTCCAGGGCG
Internal bar code:AAAGGGGTGTTAGTTGGGCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1080
LEAP-Seq percent confirming:67.5
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTACATCTCAGCCGACG
Suggested primer 2:GCCTTGCCTTGAAGGTGTTG