Insertion junction: CLIP2.038985_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038985
Chromosome:chromosome 2
Location:1294627
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082400 (1 of 2) IPR000104//IPR001394//IPR028889 - Antifreeze protein, type I // Peptidase C19, ubiquitin carboxyl-terminal hydrolase // Ubiquitin specific protease domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAACTAGATGGCGTCACGTGCGCCCGCTGCAGCCTGGCGGCGGCGCTG
Internal bar code:AGATGTTTTCGGCACGTATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1815
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGCAAAACCAACGGAAAG
Suggested primer 2:GCACTCCTGTCTTCTGCACT