Insertion junction: CLIP2.038988_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.038988
Chromosome:chromosome 16
Location:4868393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687117 (1 of 2) PF14249 - Tocopherol cyclase (Tocopherol_cycl) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAGCGGCGGGTCCCAGGGGTCGACTGCGAATGGCTGGGCGGGCGGCGG
Internal bar code:GTATCTAGTACGGGTATTAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:827
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAGAACTGGGGGCAGTC
Suggested primer 2:ATCGAATGCCCCGTATGGTC