Insertion junction: CLIP2.038988_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038988
Chromosome:chromosome 16
Location:4868393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687117 (1 of 2) PF14249 - Tocopherol cyclase (Tocopherol_cycl) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAGGTTCGTGAGTGCGTGATTGCGTGCGTGCGTGCGTGTGGGCATGG
Internal bar code:TGGCGGGCCCGTTCAGGGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1151
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGAATGCCCCGTATGGTC
Suggested primer 2:GAGAAGAACTGGGGGCAGTC