Insertion junction: CLIP2.038992_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038992
Chromosome:chromosome 7
Location:2286370
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327800 (1 of 2) K05681 - ATP-binding cassette, subfamily G (WHITE), member 2 (ABCG2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGGGCCCGGACTGCCAAGCCCTGCTTTTCCACCACGCACTCACCCAC
Internal bar code:CTTACTCGGTTCAATACGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1849
LEAP-Seq percent confirming:92.0635
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGACGCACTGGACTTCTT
Suggested primer 2:CCTGTGTGCATGTGTGTGTG