Insertion junction: CLIP2.038998_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.038998
Chromosome:chromosome 11
Location:294024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467563 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGGAGGACGTGTCGGAGCCGGTGGACCCCACTAGCTGGCTCCTCCC
Internal bar code:ATCTGACTCGGGTCCGCTTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:92
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACGTGACGGACCTGATG
Suggested primer 2:AATAATGGCATTCGCGTGGC