Insertion junction: CLIP2.038998_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.038998
Chromosome:chromosome 11
Location:294025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467563 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGCATTGGTTTCGCCCGCATTCTCCCCACATGGGCTAACTGGGTCTC
Internal bar code:TAGAAAGGTAACCCAGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2375
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:108
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:AATAATGGCATTCGCGTGGC
Suggested primer 2:CCTACGTGACGGACCTGATG