Insertion junction: CLIP2.039010_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039010
Chromosome:chromosome 17
Location:854436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702250 TRP4 Transient receptor potential ion channel protein; (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCTCAAGGTTGCCATACTTGACAGCGTGCCAAGCCGTGCCTGCCGAG
Internal bar code:GTTAGCGCACTCACGTACTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3370
LEAP-Seq percent confirming:91.7431
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATACGGTCGCATACTCC
Suggested primer 2:GAACTTGACCTGGTAGGGGC