Insertion junction: CLIP2.039016_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039016
Chromosome:chromosome 17
Location:430256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698850 ISA2,STA8 (1 of 2) 3.2.1.68 - Isoamylase / Debranching enzyme; Isoamylase-type starch debranching enzyme 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCCACACTGCCTTGCATCCCTTTCCCCCACCACGGCTTCCCTCTACC
Internal bar code:GATAGTTTTTGTCGTACGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1883
LEAP-Seq percent confirming:48.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGTATGCGGGAGTGCGTATG
Suggested primer 2:CCCCCGTCTCACCTGTAGTA