Insertion junction: CLIP2.039017_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.039017
Chromosome:chromosome 10
Location:3926531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446650 HEL46,MER (1 of 1) K15271 - ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12] (HFM1, MER3); conserved protein with DEAD/DEAH box helicase domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACCCCCGAGAAGCTGGACGCGCTCAGCCGCAAGCTCAGCGAGCAGCA
Internal bar code:GTTAAACTGAGGAATCGTGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5065
LEAP-Seq percent confirming:98.4127
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTACGCATTGCCTCAACT
Suggested primer 2:TAAGGCATGGCGCAGTTACA