Insertion junction: CLIP2.039025_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039025
Chromosome:chromosome 3
Location:1931382
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155150 (1 of 11) PF07173 - Protein of unknown function (DUF1399) (DUF1399) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCGCTGCGCGTTCCCGCACGGTCGCATCGCCTATTTGGTCTCCTCAA
Internal bar code:CCTATTACTACTTATTAGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3160
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTACACGACACGGCAACT
Suggested primer 2:CGATTTTCTGCGCCTGCTAC