Insertion junction: CLIP2.039040_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039040
Chromosome:chromosome 2
Location:4783922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108800 TPR10,DNJ26 (1 of 1) IPR001623//IPR019734 - DnaJ domain // Tetratricopeptide repeat; Tetratricopeptide-repeat protein 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGGATCATGGCAGGGCAAGGCAAGCGGTAAGGGCTCCGCCCCGCCCCG
Internal bar code:AGGTAGTGGGCGCTGGTAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:978
LEAP-Seq percent confirming:17.2414
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTCGCAACAGCAGCAAC
Suggested primer 2:AGATGTCCTGGTAATGCGGC