Insertion junction: CLIP2.039040_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039040
Chromosome:chromosome 2
Location:4783936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108800 TPR10,DNJ26 (1 of 1) IPR001623//IPR019734 - DnaJ domain // Tetratricopeptide repeat; Tetratricopeptide-repeat protein 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTCGCTGCAGGTCCGGCGCGCGGCTGATGACCAGCAAGCCGCACAGC
Internal bar code:AGGTAGTGGGCGCTGGTAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:260
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGTCCTGGTAATGCGGC
Suggested primer 2:TTTCTCGCAACAGCAGCAAC