Insertion junction: CLIP2.039051_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039051
Chromosome:chromosome 13
Location:4734989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g604250 (1 of 1) IPR002889//IPR003882//IPR013994 - Carbohydrate-binding WSC // Pistil-specific extensin-like protein // Carbohydrate-binding WSC, subgroup intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCAAATCGGACGCGCCCAGCCTTCACTTCGGACGCGCCCAGCCGTTAA
Internal bar code:AACAATAATCTTGGACTAACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5239
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAACATGGAGGCGCATAG
Suggested primer 2:GGCAAACGGCGTTCTTGAAT