Insertion junction: CLIP2.039055_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039055
Chromosome:chromosome 3
Location:3344897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g166100 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGAGCGCAGGCCGGCAGAGGACCGGGGGGACACAGGCAGGTGGCGAG
Internal bar code:TACATGGTGAGGATTTCTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:752
LEAP-Seq percent confirming:17.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTCAAAAGCACTCCGCA
Suggested primer 2:TTTAGCGCATTCACCCCCAT