Insertion junction: CLIP2.039063_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039063
Chromosome:chromosome 9
Location:3778090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397586 (1 of 2) IPR000719//IPR001245//IPR002290//IPR011009//IPR017986//IPR020635 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // WD40-repeat-containing domain // Tyrosine-protein kinase, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGGCCGCGTCGTCTTCCTCCGCCAGCCCCAACGCCGAAATCACCT
Internal bar code:CTTAAGGGTGCAGTTTTTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:93
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTCCAGAAGTTCGCAA
Suggested primer 2:GACAAGGGTATCTAGGGCGC