Insertion junction: CLIP2.039077_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.039077
Chromosome:chromosome 10
Location:3436249
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444250 (1 of 13) IPR001251//IPR011074 - CRAL-TRIO lipid binding domain // CRAL/TRIO, N-terminal domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAACACCACATATCCGCCCCACCTTGTGAGTGACAGGAGGCGGCTGT
Internal bar code:GGTATCACCCACTTACACCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:806
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGAGCACACACCTTCTC
Suggested primer 2:TCCTCGCAGCAGGCTTTTAA