Insertion junction: CLIP2.039081_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.039081
Chromosome:chromosome 3
Location:6690912
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195550 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCCTCAAGGCCGCGCAGCACCAGACGCGTGTCGTGCAGGGGCGCGA
Internal bar code:GGCCATCGTTCACGCTGCACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2898
LEAP-Seq percent confirming:88.5714
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTATGACCACGACACCA
Suggested primer 2:CAATTTCCCACTTGCGTGCA