Insertion junction: CLIP2.039085_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.039085
Chromosome:chromosome 17
Location:3433586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g723450 FAP13 WD-repeat Flagellar Associated Protein 13; (1 of 1) IPR001680//IPR007111//IPR017986//IPR020472//IPR027417 - WD40 repeat // NACHT nucleoside triphosphatase // WD40-repeat-containing domain // G-protein beta WD-40 repeat // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTCTACATGTATGACCTCCCCCACCTTCCCATGCACACCACATGCAC
Internal bar code:CACTCGAAGTGGTAGACTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1631
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTGTGTGTGGA
Suggested primer 2:AATGCCCTTCCCTCACGATG