Insertion junction: CLIP2.039102_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.039102
Chromosome:chromosome 8
Location:1049905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362150 FAP361,FAP154 Flagellar Associated Protein 361 with PAS Sensory Domain; (1 of 28) PTHR31600//PTHR31600:SF2 - FAMILY NOT NAMED // TINY MACROCYSTS PROTEIN B-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCCTCATCCCTGCAGGTGGCTGTGGCGCAGCGCAACATGGAGCGAG
Internal bar code:CCCGATTAGGTTGTGTAAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1133
LEAP-Seq percent confirming:26.087
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGAAGAAGAGCTGGAACT
Suggested primer 2:GTGTCTTTGCCTTGCCTTCG