Insertion junction: CLIP2.039108_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.039108
Chromosome:chromosome 11
Location:1959499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467778 (1 of 1) K00761 - uracil phosphoribosyltransferase (upp, UPRT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCTTAGCCTCACAAACCCCACCTTCCCACCCACGCACACGCAAACGC
Internal bar code:GACAAGTATGCACATGGCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:427
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGATATCAGCCCCAACCCCT
Suggested primer 2:GTGGGTGTGTGCTTGGTTTC