Insertion junction: CLIP2.039112_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.039112
Chromosome:chromosome 8
Location:1056244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362200 (1 of 226) IPR012337 - Ribonuclease H-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCACTAGTTGCTGCTGTGTGTCTTTGCGCGCACAGGGCAAGAGCACC
Internal bar code:TTCCATTAGAAGCTTTTGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2037
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGATGCTGGGTTCCGACT
Suggested primer 2:CTTATTCCGCGAGCCTGCTA